Scott, J.T., M.J. McCarthy, and H.W. Paerl. 2019. Nitrogen transformations differentially affect nutrient-limited primary production in lakes of varying trophic state. Limnology and Oceanography Letters 4: 96-104.
*Baker, B.C., A.E. Wilson, and J.T. Scott. 2018. Phytoplankton N2 fixation efficiency at its effect on harmful algal blooms. Freshwater Science 37: 264-275.
Stelzer, R.S., and J.T. Scott. 2018. Predicting nitrate retention at the groundwater-surface water interface in sandplain streams. JGR Biogeosciences 123: 2824-2838. doi 10.1029/2018JG004423
*Speir, S.L., J.M. Taylor, and J.T. Scott. 2017. Seasonal differences in relationships between nitrate concentrations and denitrification rates in ditch sediments vegetated with rice cutgrass. Journal of Environmental Quality 46: 1500-1509.
*Rodman, A.R., and J.T. Scott. 2017. Comparing two periphyton collection methods commonly used for stream bioassessment and the development of numeric nutrient standards. Environmental Monitoring and Assessment 189: 360.
*West, A.O., and J.T. Scott. 2016. Black disk visibility, turbidity, and total suspended solids in rivers: A comparative evaluation. Limnology and Oceanography: Methods 14: 658-667.
Paerl, H.W., J.T. Scott, M.J. McCarthy, S.E. Newell, W.S. Gardner, K.E. Havens, D.K. Hoffman, S.W. Wilhelm, and W.A. Wurtsbaugh. 2016. It takes two to tango: When and where dual nutrient reductions are needed to protect lakes and downstream ecosystems. Environmental Science and Technology 50: 10805-10813.
*West, A.O., J.M. Nolan, and J.T. Scott. 2016. Optical water quality and human perceptions of rivers: an ethnohydrology study. Ecosystem Health and Sustainability Volume 2 Issue 8:11 pages
*Halvorson, H., E.E. Scott*, S.A. Entrekin, M.A. Evans-White, and J.T. Scott. 2016. Interactive effects of light and dissolved phosphorus on leaf litter microbial metabolism and stoichiometry. Freshwater Biology 61: 1006-1019.
Scott, J.T. and B.E. Haggard. 2015. Implementation of effects-based water quality standards for eutrophication: Linking standard development and assessment methodology. Journal of Environmental Quality 44: 1503-1512.
Stelzer, R.S., J.T. Scott, and L.A. Bartsch. 2015. Buried particulate organic carbon stimulates denitrification and nitrate retention in stream sediments at the groundwater - surface water interface. Freshwater Science 34: 161-171.
*Grantz, E.M., B.E. Haggard, and J.T. Scott. 2014. Stoichiometric imbalance in rates of nitrogen and phosphorus retention, storage, and recycling perpetuate nitrogen deficiency in highly-productive reservoirs. Limnology and Oceanography 59: 2203-2216.
Scott, J.T., and E.M. Grantz*. 2013. N 2 fixation exceeds internal nitrogen loading as a phytoplankton nutrient source in perpetually nitrogen-limited reservoirs. Freshwater Science 32: 849-861.
Scott, J.T., M.J. McCarthy, T. Otten, M. Steffen, B.C. Baker*, E.M. Grantz*, S. wilhelm, and H. Paerl. 2013. Comment: An alternative interpretation of the relationship between TN:TP and microcystin in Canadian lakes. Canadian Journal of Fisheries and Aquatic Sciences 70: 1265-1268.
Jarvie, H.P., A.N. Sharpley, J.T. Scott, B.E. Haggard, M.J. Bowes, and L.B. Massey. 2012. Within-river phosphorus retention: accounting for a missing piece in the watershed phosphorus puzzle. Environmental Science and Technology 46: 13248-13292.
Scott, J.T., J.B. Cotner, and T. LaPara. 2012. Variable stoichiometry and homeostatic regulation of bacterial biomass elemental composition. Frontiers in Microbiology 3: 1-8. DOI 10.3389/fmicb.2012.00042
*Grantz, E.M., A. Kogo*, and J.T. Scott. 2012. Partitioning ecosystem-scale denitrification in three shallow reservoirs using in situ dinitrogen accumulation and intact core experiments. Limnology and Oceanography 57: 925-935.
*Drake, W.M., J.T. Scott, M. Evans-White, B.E. Haggard, A.N. Sharpley, C.W. Rogers*, and E.M. Grantz*. 2012. The effect of periphyton stoichiometry and light on biological phosphorus immobilization and release in streams. Limnology 13: 97-106.
J.T. Scott, B.E. Haggard, A.N. Sharpley, and J.J. Romeis. 2011. Changepoint analysis f phosphorus trends in the Illinois River (Oklahoma) demonstrates the effects of watershed management. Journal of Environmental Quality 40: 1249-1256.
Scott, J.T., and M.J. McCarthy. 2010. Nitrogen fixation may not balance the nitrogen pool of lakes over timescales relevant to eurotrophication management. Limnology and Oceanography 55: 1265-1270.
Paerl, H.W. and J.T. Scott. 2010. Throwing fuel on the fire: Synergistic effects of excessive nitrogen inputs and global climate change on harmful algal blooms. Environmental Science and Technology 44:7756-7758.
Cotner, J.B., E. Hall, J.T. Scott, and M. Heldal. 2010. Freshwater bacteria are stoichiometrically flexible and have a nutrient composition similar to seston. Frontiers in Microbiology 1: 1-11; DOI 10.3389/fmicb.2010.00132.